Interdisciplinary Workshop on:

   

Critical phenomena and challenges emerging from dormancy

    

18th and 19th of December 2023


Interdisciplinary Workshop on:

Critical phenomena and challenges emerging from dormancy

18th and 19th of December 2023

Topic description:

Across the tree of life, species have evolved the capacity to contend with sub-optimal conditions by engaging in dormancy, whereby individuals enter a reversible state of reduced or vanishing metabolic activity, temporarily disconnecting themselves from their `environment'. Dormancy traits have independently evolved numerous times and come in many different forms. The strategy is employed by many microorganisms, plants and animals, but for example also human cancer cells, and of course plant seeds (who often delay germination despite optimal conditions as part of a `bet-hedging strategy').

On the population level, dormancy leads to pools of inactive individuals (`seed banks') with a profound impact on the dynamics of affected systems (typically introducing memory, resilience and diversity). In population genetics, for example, dormancy is a major driver behind the preservation of genetic diversity. In cancer biology, dormancy plays a key role in therapy resistance, where cancer cells switch into dormancy in response to chemo- or immunotherapy. In ecology, dormancy lies at the heart of long-term resilience of ecosystems, with potential implications in the face of climate change. In statistical physics, a type switching mechanism can lead to uphill diffusion and the failure of classical transport laws.

The abstract classification and identification of the critical features related to dormancy is crucial for a conceptual understanding of the ways in which seed banks store information and impart memory that gives rise and affects to multi-scale structures in space and time, mediated by complex networks of interactions. Mathematically, only the first initial steps have been taken in modeling this complexity and in understanding the emerging structures. It will require a combined and sustained effort of life scientists, mathematicians, computer scientists, physicists etc. to tackle the critical problems that lie ahead.

Topic description:

Across the tree of life, species have evolved the capacity to contend with sub-optimal conditions by engaging in dormancy, whereby individuals enter a reversible state of reduced or vanishing metabolic activity, temporarily disconnecting themselves from their `environment'. Dormancy traits have independently evolved numerous times and come in many different forms. The strategy is employed by many microorganisms, plants and animals, but for example also human cancer cells, and of course plant seeds (who often delay germination despite optimal conditions as part of a `bet-hedging strategy').
   

On the population level, dormancy leads to pools of inactive individuals (`seed banks') with a profound impact on the dynamics of affected systems (typically introducing memory, resilience and diversity). In population genetics, for example, dormancy is a major driver behind the preservation of genetic diversity. In cancer biology, dormancy plays a key role in therapy resistance, where cancer cells switch into dormancy in response to chemo- or immunotherapy. In ecology, dormancy lies at the heart of long-term resilience of ecosystems, with potential implications in the face of climate change. In statistical physics, a type switching mechanism can lead to uphill diffusion and the failure of classical transport laws.

The abstract classification and identification of the critical features related to dormancy is crucial for a conceptual understanding of the ways in which seed banks store information and impart memory that gives rise and affects to multi-scale structures in space and time, mediated by complex networks of interactions. Mathematically, only the first initial steps have been taken in modeling this complexity and in understanding the emerging structures. It will require a combined and sustained effort of life scientists, mathematicians, computer scientists, physicists etc. to tackle the critical problems that lie ahead.

Program:

Monday, December 18, 2023



09:00 am       Welcome


09:05 am       Opening Lecture

Jay T. Lennon (Indiana University Bloomington)
Humboldt Prize 2022

"Principles of seed banks: complexity emerging from dormancy" 


09:50 am       Coffee break


10:00 am       Session on Dormancy in population genetics and

evolution

Maite Wilke Berenguer (Humboldt-Universität zu Berlin)   

"Coalescent models for dormancy and seed banks"
Adrián González Casanova (University of California, Berkeley)   

"Effects of latency in population genetics"

Apolline Louvet (University of Bath)   

"Dormancy in urban ecosystems: the example of urban tree bases"
Franz Baumdicker (Eberhard Karls Universität Tübingen)   

"Genome-wide linkage due to clonal reproduction and other
challenges for 
the analysis of dormancy in bacterial populations"


12:30 pm       Lunch break


02:00 pm       Session on Dormancy and cancer biology

Ann Zeuner (Istituto Speriore di Sanità, Roma)   

"Cancer dormancy: a great challenge for scientists, patients and
doctors"
Joel Brown (Moffitt Cancer Center, Florida)   

"The evolutionary ecology of dormancy in nature and in cancer"

Anna Kraut (University of Minnesota Twin Cities)   

"Mathematical models for dormancy and therapy evasion in cancer"
Manuel Esser (Universität Bonn)   

"Dormancy in fitness valleys and changing environments"


06:00 pm       Dinner & discussion

Plenum

 

Tuesday, December 19, 2023


09:00 am       
Session on Dormancy in ecology and biodiversity

Nathan Wisnoski (Mississippi State University)   

"The spatial ecology of dormancy in multispecies communities"
András Tóbías (Budapest University of Technology and
Economics)   

"Invasion and fixation of microbial dormancy traits in models
of stochastic population dynamics"
Tobias Paul (Humboldt-Universität zu Berlin)   

"The impact of dormancy on speciation and the species
abundance distribution"
Andreas Greven (Friedrich-Alexander Universität Erlangen- 

Nürnberg)

"Spatial systems of interacting Fisher-Wright diffusions with
seedbanks: finite system scheme"

Ashley Shade (Université de Lyon)   

"Exploring reactivation as a mechanism of microbiome
resilience"


12:00 pm       Lunch break


02:00 pm       Session on Dormancy and switching in statistical

physics and random networks

Cristian Giardina (Università di Modena) 

"Complexity emerging from dormancy in models of transport"
Simone Floreani (University of Oxford)   

"Time non-locality from long dormancy"
Michel Reitmeier (Goethe-Universität Frankfurt)   

"The Contact Process with switching"   
Jan-Lukas Igelbrink (Johannes-Gutenberg Universität Mainz)   

"Hammond and Sheffield's power law Pólya's urn"
Franziska Matthäus (Goethe-Universität Frankfurt)   

"Is subdiffusion a useful concept to model dormancy?"


05:00 pm       Wrap-up and closing





   

Program:

Monday, December 18, 2023



09:00 am       Welcome


09:05 am       Opening Lecture

Jay T. Lennon (Indiana University Bloomington) -Humboldt Prize 2022

"Principles of seed banks: complexity emerging from dormancy" 


09:50 am       Coffee break


10:00 am       Session on Dormancy in

population genetics and

evolution


Maite Wilke Berengue (Humboldt-Universität zu Berlin)
"Coalescent models for dormancy and seed banks"


Adrián González Casanova
(University of California, Berkeley)
"Effects of latency in population genetics"


Apolline Louvet (University of Bath)
"Dormancy in urban ecosystems: the example of urban tree bases"


Franz Baumdicker (Eberhard Karls Universität Tübingen)

"Genome-wide linkage due to clonal reproduction and other challenges for the analysis of dormancy in bacterial populations"


12:30 pm       Lunch break


02:00 pm       Session on Dormancy and

cancer biology

Ann Zeuner (Istituto Speriore di Sanità, Roma)
"Cancer dormancy: a great challenge for scientists, patients and doctors"


Joel Brown (Moffitt Cancer Center, Florida)

"The evolutionary ecology of dormancy in nature and in cancer"

Anna Kraut (University of Minnesota Twin Cities)
"Mathematical models for dormancy and therapy evasion in cancer"


Manuel Esser (Universität Bonn)
"Dormancy in fitness valleys and changing environments"


06:00 pm       Dinner & discussion

Plenum

Tuesday, December 19, 2023


09:00 am       
Session on Dormancy in

ecology and biodiversity


Nathan Wisnoski (Mississippi State University)
"The spatial ecology of dormancy in multispecies communities"


András Tóbías (Budapest University of Technology and Economics)
"Invasion and fixation of microbial dormancy traits in models of stochastic population dynamics"


Tobias Paul (Humboldt-Universität zu Berlin)
"The impact of dormancy on speciation and the species

abundance distribution"


Andreas Greven (Friedrich-Alexander Universität Erlangen-Nürnberg)

"Spatial systems of interacting Fisher-Wright diffusions with seedbanks: finite system scheme"


Ashley Shade (Université de Lyon)

"Exploring reactivation as a mechanism of microbiome resilience"


12:00 pm       Lunch break


02:00 pm       Session on Dormancy and

switching in statistical

physics and random networks


Cristian Giardina (Università di Modena)

"Complexity emerging from dormancy in models of transport"


Simone Floreani (University of Oxford)
"Time non-locality from long dormancy"


Michel Reitmeier (Goethe-Universität Frankfurt)
"The Contact Process with switching"


Jan-Lukas Igelbrink (Johannes-Gutenberg Universität Mainz)
"Hammond and Sheffield's power law Pólya's urn"


Franziska Matthäus (Goethe-Universität Frankfurt)
"Is subdiffusion a useful concept to model dormancy?"


05:00 pm       Wrap-up and

closing

General information:

Date: 18th and 19th of December 2023

Location: Goethe-University Frankfurt, Casino building on Westend Campus, Renate-von-Metzler-Saal (upper floor)

Public transport: The closest subway station is "Holzhausenstraße" which is frequented by lines U1/2/3/8.
Bus stops include "Bremer Straße" (lines 64,75), "Uni Campus Westend" (lines 36,75) and "Miquel-/Hansaallee" (line 32).

From "Frankfurt Hauptbahnhof" (main train station) take subway line U4 or U5 for just one stop to get to "Willy-Brandt-Platz" (direction: "Preungesheim" or "Seckbacher Landstraße" resp.). From here change to lines U1/2/3/8 (direction: opposite of direction "Frankfurt Südbahnhof") to get to "Holzhausenstraße".


From "Frankfurt Hauptwache" take lines U1/2/3/8 to "Holzhausenstraße" 

(direction: opposite of direction "Frankfurt Südbahnhof").

For detailed travel directions use Frankfurts public transport website:  https://www.rmv.de/c/en/homepage

Westend-Campus website: https://www.goethe-university-frankfurt.de/73011530/Goethe_University_Locations?locale=en

Hotel recommendations: 

Campus map

General information:

Date: 18th and 19th of December 2023

Location: Goethe-University Frankfurt, Casino building on Westend Campus, Renate-von-Metzler-Saal (upper floor)

Public transport: The closest subway station is "Holzhausenstraße" which is frequented by lines U1/2/3/8.
Bus stops include "Bremer Straße" (lines 64,75), "Uni Campus Westend" (lines 36,75) and "Miquel-/Hansaallee" (line 32).

From "Frankfurt Hauptbahnhof" (main train station) take subway line U4 or U5 for just one stop to get to "Willy-Brandt-Platz" (direction: "Preungesheim" or "Seckbacher Landstraße" resp.). From here change to lines U1/2/3/8 (direction: opposite of direction "Frankfurt Südbahnhof") to get to "Holzhausenstraße".


From "Frankfurt Hauptwache" take lines U1/2/3/8 to "Holzhausenstraße" 

(direction: opposite of direction "Frankfurt Südbahnhof").

For detailed travel directions use Frankfurts public transport website:  https://www.rmv.de/c/en/homepage

Westend-Campus website: https://www.goethe-university-frankfurt.de/73011530/Goethe_University_Locations?locale=en

Hotel recommendations: 

Campus map

Registration:

To register for the workshop please contact Ms. Suckfüll via email at suckfuel *AT* math.uni-frankfurt.de.

If you would like to participate in the workshop VIA ZOOM please also register here.

REGISTRATION for both (presence or ZOOM)  ends on Dec. 15th.

Registration:

To register for the workshop please contact Ms. Suckfüll via email at suckfuel *AT* math.uni-frankfurt.de.

If you would like to participate in the workshop VIA ZOOM please also register here.

REGISTRATION for both (presence or ZOOM)  ends on Dec. 15th.

Material:

Please click on the material to open it in a new tab.

Material:

Please click on the material to open it in a new tab.